Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889740.1_cds_XP_016444416.1_39480
CDS Infomation

[gene=LOC107769695] [db_xref=GeneID:107769695] [protein=pentatricopeptide repeat-containing protein At1g60770-like] [protein_id=XP_016444416.1] [location=join(91759..91995,93222..94466)] [gbkey=CDS]
Sequence

ATGGCGTCATTTATTCAGAAGTTCTCGTTGAAAACGAAGAACATTGGGAAAAGGGCTACA
AAGAAGTACTTAGAAGATGCACTTTACAAGAATCTGTTCAAGGAAGGAGGCGAAGAGAAC
CACGTTAGGAAAAATCTGAATCAATTCTTGAAATCCCACAAAAGTGCTTACAAATGGGAA
GTTGGAAAATCCCTCAAAGTCTTACGCCAACGCAAGCTTTACACCCCAGCACTCAAGTTA
TCAGAAACAATGGAAAAAAGGGGCATGAACAAGACTATTAGTGATCAAGCTATACATCTG
GATCTTGTTGCCAAGAGTAAAGGGATTGAAGCAGCGGAGACTTATTTTTCGAATCTCCCA
GAGGCATCGAAAAATCTTGTCACCTATTCTGCTCTTCTGAATTGCTACTGCAAGGAATTA
ATGACTGAAAAAGCTGAGGCGCTGATAGAGAAAATGAAAGAACTTAACTTAGGTTTAAGC
TCCATGCCTTATAACAGCTTGATGACTCTTTACACAAAAACTGGGCATCCAGAAAAAATT
CCAGCCATTATTCAAGAAATGAAGGCCTATGATGTAATGCCAGATTCTTACACCTACAAC
GTTTGGATGAGGGCTCTTTCTTCTATGAATGATATTTCTGGGGTCGAGAGGGTTATTGAT
GAAATGAAGAGAGATGGTCGTGTAGCTGATGATTGGACTACATATAGCAATTTGGCATCA
ATTTATGCAGATGCTGGCTTAACCGATAAAGCAGTGAAGGCACTCAAGGAACTGGAGAAG
AAAAATGCATGCCGCAATGTTACTGCATACCAGTTTCTGATCACATTGTATGGTCGTGTT
GGAAATTTGTTGGAAGTATATCGTGTATGGCATTCTTTGAGGCTTGCTTTTCCCAGAACG
GCAAACATAAGCTATCTTAACATGATTCAAGTTTTGGTTAACTTGAATGACTTACCGGGT
GCTGAGAAATGCTTCAAGGAATGGGAGTCTGGATGCCCAACTTATGACATACGTGTAGCA
AATGTTCTTATAGGAGCTTACACTAAACAAGGCTCTTTGGAGAAAGCTGAAAAGCTCAAG
GAATGGGCCCGAAGGAGTGGAGCTAAGCCTAATGCTAAGACATGGGAGATTTTCGGGGAT
TATTATCTGCAAAATGGTGATATCAAATCAGCAGTTGATTGTGTTGACAAGGCAATTTCA
ACTGGTAGAGGTGATGGTGGCAAGTGGGTTCCATCATCTGCTATCGTTAGAAAATTCATG
AGTCATTTTGAACAAAATAAAGATGTCGATGGTGCAGAACATTTTACTGAAATTTTGAAG
AAGGCTAAGGATGAGTTGGGGGTTGACATATTTGAATCTTTGATAAGAACTTATGTAGCT
TCTGGAAAAACAAGTCCTATCATGCGTCGCCGGATTAAAATGGAGAATATAGAGCTGAGC
GAAGAAGGTAAAAGATTATTGGACTCCATCTCTGTGGAGTGA

Peptide Sequence

PEP ID

XP_016444416.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like [Nicotiana tabacum]
Sequence

MASFIQKFSLKTKNIGKRATKKYLEDALYKNLFKEGGEENHVRKNLNQFLKSHKSAYKWE
VGKSLKVLRQRKLYTPALKLSETMEKRGMNKTISDQAIHLDLVAKSKGIEAAETYFSNLP
EASKNLVTYSALLNCYCKELMTEKAEALIEKMKELNLGLSSMPYNSLMTLYTKTGHPEKI
PAIIQEMKAYDVMPDSYTYNVWMRALSSMNDISGVERVIDEMKRDGRVADDWTTYSNLAS
IYADAGLTDKAVKALKELEKKNACRNVTAYQFLITLYGRVGNLLEVYRVWHSLRLAFPRT
ANISYLNMIQVLVNLNDLPGAEKCFKEWESGCPTYDIRVANVLIGAYTKQGSLEKAEKLK
EWARRSGAKPNAKTWEIFGDYYLQNGDIKSAVDCVDKAISTGRGDGGKWVPSSAIVRKFM
SHFEQNKDVDGAEHFTEILKKAKDELGVDIFESLIRTYVASGKTSPIMRRRIKMENIELS
EEGKRLLDSISVE

Transcript Sequence

Gene sequence data has not been registered.